Difference between revisions of "Outbreak investigations: 10 steps, 10 pitfalls"

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| rowspan="7" | 1. Determine the existence of an outbreak
 
| rowspan="7" | 1. Determine the existence of an outbreak
| rowspan="2" style="font-weight:normal;" | -   Determine whether there is a clustering of cases, a cluster of cases of an   outbreak-prone disease or a single case of a disease of international   importance.
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| style="font-weight:normal;" | - Determine whether there is a   clustering of cases, a cluster of cases of an outbreak-prone disease or a   single case of a disease of international importance.
| rowspan="2" | Taking   all reported clusters at face value:
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| Taking all reported clusters at   face value:
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| rowspan="2" | - Review incidence in the past in the area of the outbreak.
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| -   Review incidence in the past in the area of the outbreak.
| rowspan="5" | Reported clusters may be pseudo-outbreaks. Check all reports for   background rates, changes in surveillance practices (e.g., increased   awareness) and change in the denominator (e.g., population movements).
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| Reported clusters may be   pseudo-outbreaks. Check all reports for background rates, changes in   surveillance practices (e.g., increased awareness) and change in the   denominator (e.g., population movements).
 
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| rowspan="2" | -  Check for recent changes in the surveillance system (numerator).
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| - Check   for recent changes in the surveillance system (numerator).
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|
 +
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| - Check  for recent changes in the population size (denominator).
 
| - Check  for recent changes in the population size (denominator).
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| rowspan="5" | 2. Confirm the diagnosis
 
| rowspan="5" | 2. Confirm the diagnosis
| rowspan="2" style="font-weight:normal;" | - Make clinical   description of a few cases to raise hypotheses in terms of diagnosis.
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| style="font-weight:normal;" | - Make clinical description of a   few cases to raise hypotheses in terms of diagnosis.
| rowspan="2" | Failing   to obtain a laboratory diagnosis
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| Failing to obtain a laboratory   diagnosis
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| rowspan="2" | - Collect the right biological specimens the right way to   confirm the suspected diagnoses.
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| -   Collect the right biological specimens the right way to confirm the suspected   diagnoses.
| rowspan="3" | Every effort must be made to obtain a diagnosis as early as   possible during the outbreak. This includes obtaining a careful clinical   description of the cases and obtaining laboratory confirmation. Ask for   assistance with respect to collecting and transporting specimens and   identifying the correct laboratory for analysis, if needed.
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| Every effort must be made to   obtain a diagnosis as early as possible during the outbreak. This includes   obtaining a careful clinical description of the cases and obtaining   laboratory confirmation. Ask for assistance with respect to collecting and   transporting specimens and identifying the correct laboratory for analysis,   if needed.
 
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| - Send  the biological samples safely and appropriately packaged to the right  laboratory.
 
| - Send  the biological samples safely and appropriately packaged to the right  laboratory.
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|- style="font-weight:bold;"
 
| rowspan="3" | 3. Define a case
 
| rowspan="3" | 3. Define a case
| rowspan="3" style="font-weight:normal;" | - Formulate a time, place and person case   definition, using generic case definition if applicable (e.g., WHO, CDC,   MoH). Multiple levels are possible, including sensitive case definitions   (adapted to the descriptive stage) and a specific one (more adapted to the   analytical stage).
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| rowspan="3" style="font-weight:normal;" | - Formulate a time,   place and person case definition, using generic case definition if applicable   (e.g., WHO, CDC, MoH). Multiple levels are possible, including sensitive case   definitions (adapted to the descriptive stage) and a specific one (more   adapted to the analytical stage).
| rowspan="2" | Defining   cases poorly
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| Defining cases poorly
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| Cases  must be defined with some attention and precision; otherwise, the case count  may too large, too small, or inaccurately defined. A good case definition is  essential to hypothesis generation. Have precise criteria, and use time,  place and person elements. Seek help if needed.
 
| Cases  must be defined with some attention and precision; otherwise, the case count  may too large, too small, or inaccurately defined. A good case definition is  essential to hypothesis generation. Have precise criteria, and use time,  place and person elements. Seek help if needed.
 
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| rowspan="3" | 4. Search for cases
 
| rowspan="3" | 4. Search for cases
| rowspan="2" style="font-weight:normal;" | -   Search for cases within the time and space limits of the case definition.
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| style="font-weight:normal;" | - Search for cases within the   time and space limits of the case definition.
| rowspan="2" | Conducting   a door-to-door case search or a survey upfront
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| Conducting a door-to-door case   search or a survey upfront
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| -  Compile and update a line listing of cases (e.g., on a spreadsheet) For each  case, document at least the date of onset, age, sex, the zone of residence  and the outcome.
 
| -  Compile and update a line listing of cases (e.g., on a spreadsheet) For each  case, document at least the date of onset, age, sex, the zone of residence  and the outcome.
 
| Case search does not need to be  done through a door-to-door survey all the time. In most cases, you can keep  these undertakings for the second part of the investigation (hypothesis  testing). For the descriptive initial part, you can (1) search for cases through  surveillance and (2) obtain denominator separately. The case search strategy  does not need to be 100% exhaustive: it needs to be uniform.
 
| Case search does not need to be  done through a door-to-door survey all the time. In most cases, you can keep  these undertakings for the second part of the investigation (hypothesis  testing). For the descriptive initial part, you can (1) search for cases through  surveillance and (2) obtain denominator separately. The case search strategy  does not need to be 100% exhaustive: it needs to be uniform.
 
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|- style="font-weight:bold;"
| rowspan="7" | 5. Generate hypotheses using descriptive   findings
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| rowspan="7" | 5. Generate hypotheses using descriptive findings
| rowspan="2" style="font-weight:normal;" | -   Describe the outbreak over time through an epidemic curve.
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| style="font-weight:normal;" | - Describe the outbreak over   time through an epidemic curve.
| rowspan="2" | Merging   the hypothesis generating and the hypothesis-testing stages
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| Merging the hypothesis   generating and the hypothesis-testing stages
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|
 
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| rowspan="2" | - Draw a spot map, and if possible, a map with incidence / 1000   population by area of residence.
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| - Draw   a spot map, and if possible, a map with incidence / 1000 population by area   of residence.
| rowspan="5" | The descriptive stage generates information (1) through   epidemiological information organized by (a) time, (b) place and (c) person   and (2) through hypothesis generating interviews. Surveys conducted in the   absence of a hypothesis clearly defined on the basis of this type of   information blur the distinction between the two stages of the investigation   and may seriously impair the capacity to formulate a conclusion.
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| The descriptive stage generates   information (1) through epidemiological information organized by (a) time,   (b) place and (c) person and (2) through hypothesis generating interviews.   Surveys conducted in the absence of a hypothesis clearly defined on the basis   of this type of information blur the distinction between the two stages of   the investigation and may seriously impair the capacity to formulate a   conclusion.
 
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| rowspan="2" | -  Calculate population-based incidence by age and sex groups.
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| -  Calculate population-based incidence by age and sex groups.
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|
 
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+
|
 +
|
 
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| -  Conduct hypothesis-generating interviews with case-patients to try to find  out what is common to all case-patients.
 
| -  Conduct hypothesis-generating interviews with case-patients to try to find  out what is common to all case-patients.
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|
 
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| rowspan="3" | 6. Test hypotheses with an analytical study
 
| rowspan="3" | 6. Test hypotheses with an analytical study
| rowspan="2" style="font-weight:normal;" | -   Write a mini-protocol to spell out the hypotheses to test and the study   design to use.
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| style="font-weight:normal;" | - Write a mini-protocol to spell   out the hypotheses to test and the study design to use.
| rowspan="2" | Believing   that a questionnaire constitutes a study protocol
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| Believing that a questionnaire   constitutes a study protocol
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| -  Conduct an analytical study (case control or cohort).
 
| -  Conduct an analytical study (case control or cohort).
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| rowspan="3" | 7. Draw conclusions
 
| rowspan="3" | 7. Draw conclusions
| rowspan="2" style="font-weight:normal;" | - Analyze the  analytical epidemiological study.
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| style="font-weight:normal;" | - Analyze the analytical   epidemiological study.
| rowspan="2" | Having   excessive confidence in the conclusions
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| Having excessive confidence in   the conclusions
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| -  Formulate conclusions that explain the facts observed.
 
| -  Formulate conclusions that explain the facts observed.
 
| The final conclusions of an  investigation are not reached as soon as a p value happens to be under 0.05.  Formulating conclusions requires review of causality criteria, examination of  the proportion of cases exposed to the suspected source, discussion of other  possible explanations and a double check to see whether the source identified  or the hypothesis considered explains all the descriptive findings.
 
| The final conclusions of an  investigation are not reached as soon as a p value happens to be under 0.05.  Formulating conclusions requires review of causality criteria, examination of  the proportion of cases exposed to the suspected source, discussion of other  possible explanations and a double check to see whether the source identified  or the hypothesis considered explains all the descriptive findings.
 
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| rowspan="5" | 8. Compare hypothesis with established facts,   additional studies
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| rowspan="5" | 8. Compare hypothesis with established facts, additional studies
| rowspan="2" style="font-weight:normal;" | -   Conduct an environmental assessment guided by the results of the analytical   study.
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| style="font-weight:normal;" | - Conduct an environmental   assessment guided by the results of the analytical study.
| rowspan="2" | Rushing   to conduct an environmental assessment
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| Rushing to conduct an   environmental assessment
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| rowspan="2" | - Review literature.
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| -   Review literature.
| rowspan="3" | In most cases, your environmental assessment will be guided and   focused by the analytical epidemiology findings to further confirm a   hypothesis. It is not a fishing expedition conducted at the early stages of   the investigation where all kinds of samples are tested in the absence of any   hypotheses to try to find an answer.
+
| In most cases, your   environmental assessment will be guided and focused by the analytical   epidemiology findings to further confirm a hypothesis. It is not a fishing   expedition conducted at the early stages of the investigation where all kinds   of samples are tested in the absence of any hypotheses to try to find an   answer.
 
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| -  Discuss conclusions with colleagues, peers and supervisors.
 
| -  Discuss conclusions with colleagues, peers and supervisors.
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| rowspan="3" | 9. Communicate findings
 
| rowspan="3" | 9. Communicate findings
| rowspan="2" style="font-weight:normal;" | -   Write a one-page draft summary report to leave in the field before departure.
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| style="font-weight:normal;" | - Write a one-page draft summary   report to leave in the field before departure.
| rowspan="2" | Failing   to communicate the results to decision-makers
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| Failing to communicate the   results to decision-makers
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| -  Communicate findings with supervisors, the laboratory and local public health  authorities.
 
| -  Communicate findings with supervisors, the laboratory and local public health  authorities.
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| rowspan="5" | 10. Execute prevention measures
 
| rowspan="5" | 10. Execute prevention measures
| rowspan="2" style="font-weight:normal;" | -   Formulate clear, specific feasible recommendations on the basis of your   findings (Who? What? When? How?).
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| style="font-weight:normal;" | - Formulate clear, specific   feasible recommendations on the basis of your findings (Who? What? When?   How?).
| rowspan="2" | Formulating  general recommendations that are not based upon findings
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| Formulating general   recommendations that are not based upon findings
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| rowspan="2" | - Ensure implementation of the recommendations.
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| -   Ensure implementation of the recommendations.
| rowspan="3" | Recommendations need to focus on those interventions that would   have prevented the outbreak or that will control it. They should be guided by   the results of the investigation, based upon evidence, focused and feasible.   Do not re-formulate all the recommendations of hygiene but focus on the   specific ones that are the key issue in the outbreak.
+
| Recommendations need to focus on   those interventions that would have prevented the outbreak or that will   control it. They should be guided by the results of the investigation, based   upon evidence, focused and feasible. Do not re-formulate all the recommendations   of hygiene but focus on the specific ones that are the key issue in the   outbreak.
 
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| -  Evaluate the relevance and effectiveness of the recommendations.
 
| -  Evaluate the relevance and effectiveness of the recommendations.
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<div style="display: inline-block; width: 25%; vertical-align: top; border: 1px solid #000; background-color: #d7effc; padding: 10px; margin: 5px;">
 +
'''FEM PAGE CONTRIBUTORS 2007'''
 +
;Editor
 +
:Vladimir Prikazsky
 +
;Contributors
 +
:Vladimir Prikazsky
 +
:yvan.hutin
 +
</div>
 
[[Category:Outbreak Investigations]]
 
[[Category:Outbreak Investigations]]

Latest revision as of 22:00, 10 April 2023


Specific recommendations
Pitfalls to avoid
1. Determine the existence of an outbreak - Determine whether there is a clustering of cases, a cluster of cases of an outbreak-prone disease or a single case of a disease of international importance. Taking all reported clusters at face value:
- Review incidence in the past in the area of the outbreak. Reported clusters may be pseudo-outbreaks. Check all reports for background rates, changes in surveillance practices (e.g., increased awareness) and change in the denominator (e.g., population movements).
- Check for recent changes in the surveillance system (numerator).
- Check for recent changes in the population size (denominator).
2. Confirm the diagnosis - Make clinical description of a few cases to raise hypotheses in terms of diagnosis. Failing to obtain a laboratory diagnosis
- Collect the right biological specimens the right way to confirm the suspected diagnoses. Every effort must be made to obtain a diagnosis as early as possible during the outbreak. This includes obtaining a careful clinical description of the cases and obtaining laboratory confirmation. Ask for assistance with respect to collecting and transporting specimens and identifying the correct laboratory for analysis, if needed.
- Send the biological samples safely and appropriately packaged to the right laboratory.
3. Define a case - Formulate a time, place and person case definition, using generic case definition if applicable (e.g., WHO, CDC, MoH). Multiple levels are possible, including sensitive case definitions (adapted to the descriptive stage) and a specific one (more adapted to the analytical stage). Defining cases poorly
Cases must be defined with some attention and precision; otherwise, the case count may too large, too small, or inaccurately defined. A good case definition is essential to hypothesis generation. Have precise criteria, and use time, place and person elements. Seek help if needed.
4. Search for cases - Search for cases within the time and space limits of the case definition. Conducting a door-to-door case search or a survey upfront
- Compile and update a line listing of cases (e.g., on a spreadsheet) For each case, document at least the date of onset, age, sex, the zone of residence and the outcome. Case search does not need to be done through a door-to-door survey all the time. In most cases, you can keep these undertakings for the second part of the investigation (hypothesis testing). For the descriptive initial part, you can (1) search for cases through surveillance and (2) obtain denominator separately. The case search strategy does not need to be 100% exhaustive: it needs to be uniform.
5. Generate hypotheses using descriptive findings - Describe the outbreak over time through an epidemic curve. Merging the hypothesis generating and the hypothesis-testing stages
- Draw a spot map, and if possible, a map with incidence / 1000 population by area of residence. The descriptive stage generates information (1) through epidemiological information organized by (a) time, (b) place and (c) person and (2) through hypothesis generating interviews. Surveys conducted in the absence of a hypothesis clearly defined on the basis of this type of information blur the distinction between the two stages of the investigation and may seriously impair the capacity to formulate a conclusion.
- Calculate population-based incidence by age and sex groups.
- Conduct hypothesis-generating interviews with case-patients to try to find out what is common to all case-patients.
6. Test hypotheses with an analytical study - Write a mini-protocol to spell out the hypotheses to test and the study design to use. Believing that a questionnaire constitutes a study protocol
- Conduct an analytical study (case control or cohort). The analytical step is a careful epidemiological study. It requires a design and an analytical plan before it is initiated. A case control study is not always the answer. Do not rush to the questionnaire but rather follow each of the 10 steps. If you do a study, write a one-page mini-protocol in bullet format.
7. Draw conclusions - Analyze the analytical epidemiological study. Having excessive confidence in the conclusions
- Formulate conclusions that explain the facts observed. The final conclusions of an investigation are not reached as soon as a p value happens to be under 0.05. Formulating conclusions requires review of causality criteria, examination of the proportion of cases exposed to the suspected source, discussion of other possible explanations and a double check to see whether the source identified or the hypothesis considered explains all the descriptive findings.
8. Compare hypothesis with established facts, additional studies - Conduct an environmental assessment guided by the results of the analytical study. Rushing to conduct an environmental assessment
- Review literature. In most cases, your environmental assessment will be guided and focused by the analytical epidemiology findings to further confirm a hypothesis. It is not a fishing expedition conducted at the early stages of the investigation where all kinds of samples are tested in the absence of any hypotheses to try to find an answer.
- Discuss conclusions with colleagues, peers and supervisors.
9. Communicate findings - Write a one-page draft summary report to leave in the field before departure. Failing to communicate the results to decision-makers
- Communicate findings with supervisors, the laboratory and local public health authorities. An investigation is not complete until the results have been communicated to those who need the information to act. A number of target audiences will need to receive the information in an adapted medium to engage in what they should do. Sending the report to a supervisor is not sufficient.
10. Execute prevention measures - Formulate clear, specific feasible recommendations on the basis of your findings (Who? What? When? How?). Formulating general recommendations that are not based upon findings
- Ensure implementation of the recommendations. Recommendations need to focus on those interventions that would have prevented the outbreak or that will control it. They should be guided by the results of the investigation, based upon evidence, focused and feasible. Do not re-formulate all the recommendations of hygiene but focus on the specific ones that are the key issue in the outbreak.
- Evaluate the relevance and effectiveness of the recommendations.


FEM PAGE CONTRIBUTORS 2007

Editor
Vladimir Prikazsky
Contributors
Vladimir Prikazsky
yvan.hutin

Contributors